EMBOSS explorer

ktcoffee

Multiple sequence alignment using T-COFFEE (read the manual)

Unshaded fields are optional and can safely be ignored. (hide optional fields)

Input section

Select an input sequence. Use one of the following three fields:

  1. To access a sequence from a database, enter the USA here:
  2. To upload a sequence from your local computer, select it here:
  3. To enter the sequence data manually, type here:
Additional section
Scoring matrix to use (blosum or pam)
Sequence order in output alignment (aligned or input)
Output section
Run section
Email address: If you are submitting a long job and would like to be informed by email when it finishes, enter your email address here.